Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm9143-201ENSMUST00000120745 745 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm15585-201ENSMUST00000149696 670 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Ang-ps1-201ENSMUST00000162314 436 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Mir3072-201ENSMUST00000175610 83 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm18351-201ENSMUST00000188646 883 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm18699-201ENSMUST00000190713 243 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm7478-201ENSMUST00000201054 581 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm5586-201ENSMUST00000206264 795 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm18192-201ENSMUST00000210174 941 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC6.07□□□□□ -1.44
Cdx1P18111 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 9530020I12Rik-202ENSMUST00000218368 1235 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 AC123058.1-201ENSMUST00000223748 437 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 AC163660.3-202ENSMUST00000224917 464 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cdx1P18111 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm7493-201ENSMUST00000085919 626 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Cdx1P18111 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 AC153862.1-201ENSMUST00000215700 3349 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Cdx1P18111 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm25762-201ENSMUST00000103984 132 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm15989-201ENSMUST00000121895 498 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm13776-201ENSMUST00000122236 1261 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx1P18111 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm23027-201ENSMUST00000158771 158 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx1P18111 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm37282-201ENSMUST00000191987 164 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm17970-201ENSMUST00000192199 685 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm37665-201ENSMUST00000192353 149 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx1P18111 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm43835-201ENSMUST00000195932 149 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm42977-201ENSMUST00000197497 144 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm43535-201ENSMUST00000197846 164 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx1P18111 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm44379-201ENSMUST00000204501 164 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Gm44268-201ENSMUST00000204814 164 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm5948-201ENSMUST00000219627 839 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 AC146596.1-201ENSMUST00000223507 223 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 AC166574.2-201ENSMUST00000226751 381 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm6807-201ENSMUST00000077435 888 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Olfr704-201ENSMUST00000080925 2124 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Olfr1043-201ENSMUST00000099907 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cdx1P18111 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms