Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm26416-201ENSMUST00000104280 134 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Gm2178-201ENSMUST00000104927 357 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Gm16073-201ENSMUST00000116032 517 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Gm12369-201ENSMUST00000121343 942 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC8.66□□□□□ -1.02
Col1a1P11087 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm43377-201ENSMUST00000201640 455 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Col1a1P11087 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC8.66□□□□□ -1.02
Col1a1P11087 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 AC154323.2-201ENSMUST00000226557 1151 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 AC123917.1-201ENSMUST00000228063 1048 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Col1a1P11087 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Col1a1P11087 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm44531-201ENSMUST00000208364 2000 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 AC132465.1-201ENSMUST00000219938 1307 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Col1a1P11087 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm16536-201ENSMUST00000162209 1589 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Col1a1P11087 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Col1a1P11087 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Gm29113-201ENSMUST00000185991 3432 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Col1a1P11087 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Col1a1P11087 Gm11443-201ENSMUST00000118790 479 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Gm11895-201ENSMUST00000122165 467 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Gm12778-201ENSMUST00000122341 333 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC8.65□□□□□ -1.02
Col1a1P11087 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC8.65□□□□□ -1.02
Col1a1P11087 Mir7082-201ENSMUST00000183526 92 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Gm37189-201ENSMUST00000192131 298 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Gm2860-201ENSMUST00000199226 707 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Col1a1P11087 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Gm10126-201ENSMUST00000221732 168 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Gm6679-201ENSMUST00000191467 1869 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Klf5-202ENSMUST00000226784 2852 ntBASIC8.65□□□□□ -1.02
Col1a1P11087 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.65□□□□□ -1.02
Col1a1P11087 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col1a1P11087 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC8.65□□□□□ -1.02
Col1a1P11087 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Col1a1P11087 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col1a1P11087 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col1a1P11087 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
Col1a1P11087 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col1a1P11087 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
Col1a1P11087 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col1a1P11087 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Col1a1P11087 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col1a1P11087 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.65□□□□□ -1.03
Col1a1P11087 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col1a1P11087 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.65□□□□□ -1.03
Col1a1P11087 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col1a1P11087 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.65□□□□□ -1.03
Col1a1P11087 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.65□□□□□ -1.03
Col1a1P11087 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.65□□□□□ -1.03
Col1a1P11087 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.65□□□□□ -1.03
Col1a1P11087 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm22774-201ENSMUST00000102084 109 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm14772-201ENSMUST00000116562 514 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm14891-201ENSMUST00000117378 596 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm11796-201ENSMUST00000120208 972 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm13669-201ENSMUST00000122366 457 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms