Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm6644-201ENSMUST00000186507 951 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm42861-201ENSMUST00000199596 634 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm18469-201ENSMUST00000208850 439 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm7210-201ENSMUST00000209309 1067 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm45481-201ENSMUST00000209717 877 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Hmgb3O54879 AC122346.1-201ENSMUST00000225266 3732 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Hmgb3O54879 Gm6350-201ENSMUST00000195099 1339 ntBASIC5.98□□□□□ -1.45
Hmgb3O54879 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Hmgb3O54879 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm26831-201ENSMUST00000181458 1380 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm23706-201ENSMUST00000104369 82 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm14036-201ENSMUST00000118248 480 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm8802-201ENSMUST00000118633 740 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm11220-201ENSMUST00000118844 475 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm13005-201ENSMUST00000119518 585 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm12993-201ENSMUST00000119900 479 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm14202-201ENSMUST00000120121 311 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm13622-201ENSMUST00000120658 433 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm13649-201ENSMUST00000122325 606 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC5.97□□□□□ -1.45
Hmgb3O54879 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm9458-201ENSMUST00000135273 727 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm6799-201ENSMUST00000186919 573 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm3142-201ENSMUST00000190107 414 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm44743-201ENSMUST00000209062 386 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm17875-201ENSMUST00000216005 941 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm9249-201ENSMUST00000221420 578 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 AC158954.1-201ENSMUST00000228272 1006 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm2531-201ENSMUST00000075609 512 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 Mir486-201ENSMUST00000093576 128 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms