Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Ddx47-201ENSMUST00000032326 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Cyp2c54-201ENSMUST00000048959 1769 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Tubd1-202ENSMUST00000069503 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Ripply1-201ENSMUST00000101217 811 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm24284-201ENSMUST00000104240 142 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm15364-201ENSMUST00000119618 585 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Llph-ps1-201ENSMUST00000121281 390 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm2986-201ENSMUST00000121603 382 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 n-R5s23-201ENSMUST00000122523 115 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm16008-201ENSMUST00000126009 810 ntTSL 3 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Scgb1b11-201ENSMUST00000186031 418 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 1700108F19Rik-204ENSMUST00000189375 494 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm43383-201ENSMUST00000195981 469 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm18340-201ENSMUST00000196342 609 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 AC132590.1-201ENSMUST00000224374 1164 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Tssk4-206ENSMUST00000228041 1217 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 AC122035.2-201ENSMUST00000228698 462 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm8394-201ENSMUST00000079684 952 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Rpl21-ps3-201ENSMUST00000080223 483 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm25852-201ENSMUST00000082790 130 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Snora43-201ENSMUST00000082924 127 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 AC159193.3-201ENSMUST00000221902 2622 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Apol7b-201ENSMUST00000089469 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm18981-201ENSMUST00000185373 1599 ntBASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx1-1G3UXB3 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Best3-201ENSMUST00000020378 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Dazap2-201ENSMUST00000000356 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gm26288-201ENSMUST00000104168 132 ntBASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gstm6-205ENSMUST00000106685 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gm14980-201ENSMUST00000121247 736 ntBASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gm22261-201ENSMUST00000158691 324 ntBASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gm6428-201ENSMUST00000161062 345 ntBASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Dcpp2-202ENSMUST00000168272 589 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 4931429L15Rik-203ENSMUST00000172280 1140 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gm34144-201ENSMUST00000197039 259 ntBASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx1-1G3UXB3 Gm31211-201ENSMUST00000199170 253 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms