Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Gm5752-201ENSMUST00000117771 594 ntBASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Gm3611-201ENSMUST00000173687 877 ntBASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Gm38063-201ENSMUST00000193990 342 ntBASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 AC154747.4-202ENSMUST00000223826 852 ntBASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 AC129017.2-201ENSMUST00000226118 1284 ntBASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chmp4bQ9D8B3 Gm45807-201ENSMUST00000209142 2874 ntBASIC9.4□□□□□ -0.91
Chmp4bQ9D8B3 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC9.4□□□□□ -0.91
Chmp4bQ9D8B3 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Chmp4bQ9D8B3 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chmp4bQ9D8B3 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chmp4bQ9D8B3 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chmp4bQ9D8B3 Gm37618-201ENSMUST00000192891 3075 ntBASIC9.4□□□□□ -0.91
Chmp4bQ9D8B3 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chmp4bQ9D8B3 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chmp4bQ9D8B3 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm43533-201ENSMUST00000202933 2936 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm25273-201ENSMUST00000104295 115 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm12361-201ENSMUST00000119806 1044 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm5270-201ENSMUST00000121506 1002 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm11188-201ENSMUST00000122382 388 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm22670-201ENSMUST00000158724 143 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Mir6930-201ENSMUST00000183859 68 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm4545-201ENSMUST00000190797 603 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm17965-201ENSMUST00000193904 517 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm26413-202ENSMUST00000198972 127 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm7542-201ENSMUST00000201140 777 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm7368-201ENSMUST00000213307 367 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 AC160635.1-201ENSMUST00000216731 474 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 AC164294.1-201ENSMUST00000224682 688 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 AC126939.4-201ENSMUST00000225360 743 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm38173-201ENSMUST00000193126 2314 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 AC122263.1-201ENSMUST00000228636 2805 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm42969-201ENSMUST00000199858 3631 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm43970-201ENSMUST00000204346 3605 ntBASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chmp4bQ9D8B3 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms