Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm10182-201ENSMUST00000178676 273 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm43471-201ENSMUST00000197550 467 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm43287-201ENSMUST00000197747 600 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm42516-201ENSMUST00000198691 767 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm16475-202ENSMUST00000209033 528 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm45475-201ENSMUST00000209381 309 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm45454-201ENSMUST00000211484 455 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 AC153845.1-201ENSMUST00000213596 428 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 AC123867.1-201ENSMUST00000224990 816 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Gm10540-201ENSMUST00000097581 276 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 AC136019.1-201ENSMUST00000226503 1412 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 AC122878.1-201ENSMUST00000227716 1460 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 CT009711.1-201ENSMUST00000223992 3040 ntBASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim8Q99PJ2 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 AC166159.1-201ENSMUST00000227154 1380 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 AC163032.1-201ENSMUST00000220671 2970 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm23946-201ENSMUST00000104423 197 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm5915-201ENSMUST00000116136 454 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm13352-201ENSMUST00000117515 262 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm12883-201ENSMUST00000117867 364 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm14830-201ENSMUST00000121899 700 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm25109-201ENSMUST00000122474 114 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm24380-201ENSMUST00000122696 324 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm5066-201ENSMUST00000188479 822 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 AL645704.1-201ENSMUST00000221642 604 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Gm2915-201ENSMUST00000222565 787 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 CT009550.3-201ENSMUST00000228542 455 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Trim8Q99PJ2 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms