Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm17821-201ENSMUST00000223448 1693 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm3203-201ENSMUST00000197670 2389 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 AC122426.1-201ENSMUST00000214736 2235 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm15109-201ENSMUST00000133085 2026 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm23701-201ENSMUST00000103893 110 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm7821-201ENSMUST00000117111 788 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm12713-201ENSMUST00000118404 764 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm18501-201ENSMUST00000185363 664 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm43558-201ENSMUST00000200155 210 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm18765-201ENSMUST00000203166 660 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm8489-201ENSMUST00000209876 1152 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm45725-201ENSMUST00000212962 337 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm8275-201ENSMUST00000219732 424 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm23054-201ENSMUST00000082804 162 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm24613-201ENSMUST00000083266 130 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm37326-201ENSMUST00000192828 3071 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scrt1Q99M85 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.61□□□□□ -1.35
Scrt1Q99M85 AC164433.1-201ENSMUST00000226138 1544 ntBASIC6.6□□□□□ -1.35
Scrt1Q99M85 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Scrt1Q99M85 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Scrt1Q99M85 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms