Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Cd22-202ENSMUST00000108125 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 B020018J22Rik-201ENSMUST00000223085 3223 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 I830077J02Rik-201ENSMUST00000098758 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Eny2-201ENSMUST00000060652 3000 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Tmem175-203ENSMUST00000120327 1811 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Mir503-201ENSMUST00000102168 71 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm13526-201ENSMUST00000117970 189 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm11926-201ENSMUST00000118520 430 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm14103-201ENSMUST00000119075 366 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm14623-201ENSMUST00000121398 603 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm27596-201ENSMUST00000185061 83 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm28384-201ENSMUST00000189079 463 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm43657-201ENSMUST00000200336 3833 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm43226-201ENSMUST00000202438 259 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 AC122251.1-201ENSMUST00000227717 639 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Lage3-203ENSMUST00000114153 1997 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Btbd11-202ENSMUST00000105306 3945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Ctcflos-204ENSMUST00000153523 3476 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm8464-201ENSMUST00000140208 2200 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm4750-202ENSMUST00000152262 2200 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 AC160340.1-201ENSMUST00000222952 3964 ntBASIC8.53□□□□□ -1.04
Clp1Q99LI9 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Clp1Q99LI9 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.04
Clp1Q99LI9 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm43981-201ENSMUST00000203285 1467 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm37066-201ENSMUST00000192713 2061 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm45767-201ENSMUST00000212778 4561 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Cdh16-213ENSMUST00000212882 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 AC154461.2-201ENSMUST00000225462 1980 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Col19a1-201ENSMUST00000051344 3336 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm17138-201ENSMUST00000165702 459 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm28586-201ENSMUST00000189857 456 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm18268-201ENSMUST00000208445 943 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 AC140409.4-201ENSMUST00000215757 538 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 AC132237.2-201ENSMUST00000221702 1209 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm6369-201ENSMUST00000069626 412 ntBASIC8.52□□□□□ -1.05
Clp1Q99LI9 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Cpne8-202ENSMUST00000064391 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms