Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm43905-201ENSMUST00000204516 204 ntBASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Gm6667-201ENSMUST00000217169 564 ntBASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Gm9110-201ENSMUST00000219035 617 ntBASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Gm17611-202ENSMUST00000220613 814 ntBASIC8.62□□□□□ -1.03
Alx1Q8C8B0 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Gm18960-201ENSMUST00000222962 713 ntBASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.62□□□□□ -1.03
Alx1Q8C8B0 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm25757-201ENSMUST00000103986 123 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm12710-201ENSMUST00000119011 216 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm16027-201ENSMUST00000161618 758 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Mir6357-201ENSMUST00000184246 104 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm27596-201ENSMUST00000185061 83 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm18501-201ENSMUST00000185363 664 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm37017-201ENSMUST00000195266 747 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm44471-201ENSMUST00000197963 100 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm44258-201ENSMUST00000204925 301 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm45782-201ENSMUST00000212670 366 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm6581-201ENSMUST00000214545 260 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 AV026068-229ENSMUST00000225516 595 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.61□□□□□ -1.03
Alx1Q8C8B0 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm12608-201ENSMUST00000122013 1715 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm15484-201ENSMUST00000118871 828 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm12944-201ENSMUST00000119262 463 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm15538-201ENSMUST00000121410 313 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm26959-201ENSMUST00000182376 978 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm27026-201ENSMUST00000183003 892 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm27401-201ENSMUST00000184052 173 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm8101-201ENSMUST00000192796 478 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm44590-201ENSMUST00000206161 391 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm45497-201ENSMUST00000211701 740 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm46379-201ENSMUST00000222551 265 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms