Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm45782-201ENSMUST00000212670 366 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Zfp874a-208ENSMUST00000225479 1092 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm11688-201ENSMUST00000122145 308 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm8046-201ENSMUST00000172151 616 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm26729-201ENSMUST00000180744 352 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm29435-201ENSMUST00000191310 689 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm38305-201ENSMUST00000194825 223 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm18562-201ENSMUST00000209949 915 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm8616-201ENSMUST00000222175 1037 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim9Q8C7M3 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Trim9Q8C7M3 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Grik1-210ENSMUST00000228034 2708 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm23484-201ENSMUST00000104178 131 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm25276-201ENSMUST00000104300 124 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm16418-201ENSMUST00000118577 171 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm14156-201ENSMUST00000121538 483 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm24139-201ENSMUST00000122780 288 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm22262-201ENSMUST00000158713 86 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm7991-201ENSMUST00000168668 591 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm6536-201ENSMUST00000171180 615 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm17973-201ENSMUST00000174509 520 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Mir6940-201ENSMUST00000183447 70 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Gm43168-201ENSMUST00000201039 1612 ntBASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim9Q8C7M3 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms