Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm5752-201ENSMUST00000117771 594 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm14787-201ENSMUST00000121236 388 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm5611-201ENSMUST00000164523 852 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm23139-201ENSMUST00000179454 132 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm44258-201ENSMUST00000204925 301 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm29759-201ENSMUST00000205860 327 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm6667-201ENSMUST00000217169 564 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm22504-201ENSMUST00000082963 139 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm22438-201ENSMUST00000104049 132 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm23527-201ENSMUST00000104570 130 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm12601-201ENSMUST00000118994 846 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm13545-201ENSMUST00000119044 482 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm22882-201ENSMUST00000157749 124 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm43664-201ENSMUST00000196038 734 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm45042-201ENSMUST00000207377 211 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps54Q5SPW0 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Vps54Q5SPW0 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Vps54Q5SPW0 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.83□□□□□ -1
Vps54Q5SPW0 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.83□□□□□ -1
Vps54Q5SPW0 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.83□□□□□ -1
Vps54Q5SPW0 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.83□□□□□ -1
Vps54Q5SPW0 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm5272-201ENSMUST00000182730 982 ntBASIC8.83□□□□□ -1
Vps54Q5SPW0 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms