Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
CiitaP79621 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.11□□□□□ -1.11
CiitaP79621 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.11□□□□□ -1.11
CiitaP79621 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.11□□□□□ -1.11
CiitaP79621 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.11□□□□□ -1.11
CiitaP79621 Gm22915-201ENSMUST00000157615 136 ntBASIC8.11□□□□□ -1.11
CiitaP79621 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.11□□□□□ -1.11
CiitaP79621 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 Gm27026-201ENSMUST00000183003 892 ntBASIC8.11□□□□□ -1.11
CiitaP79621 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC8.11□□□□□ -1.11
CiitaP79621 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.11□□□□□ -1.11
CiitaP79621 Gm38170-201ENSMUST00000195404 816 ntBASIC8.11□□□□□ -1.11
CiitaP79621 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.11□□□□□ -1.11
CiitaP79621 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 Gm18226-201ENSMUST00000215261 521 ntBASIC8.11□□□□□ -1.11
CiitaP79621 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC8.11□□□□□ -1.11
CiitaP79621 AC164550.1-201ENSMUST00000217821 1066 ntBASIC8.11□□□□□ -1.11
CiitaP79621 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.11□□□□□ -1.11
CiitaP79621 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.11□□□□□ -1.11
CiitaP79621 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Gm38263-201ENSMUST00000195879 3059 ntBASIC8.11□□□□□ -1.11
CiitaP79621 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.11□□□□□ -1.11
CiitaP79621 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CiitaP79621 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CiitaP79621 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.1□□□□□ -1.11
CiitaP79621 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
CiitaP79621 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 AC130219.1-201ENSMUST00000228406 3433 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Gm11371-201ENSMUST00000120294 385 ntBASIC8.1□□□□□ -1.11
CiitaP79621 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Mir1981-201ENSMUST00000157934 82 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Gm20702-201ENSMUST00000176181 460 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CiitaP79621 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Gm38079-201ENSMUST00000195603 154 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.1□□□□□ -1.11
CiitaP79621 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Gm5723-201ENSMUST00000203096 432 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Gm44252-201ENSMUST00000204187 330 ntBASIC8.1□□□□□ -1.11
CiitaP79621 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.1□□□□□ -1.11
CiitaP79621 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CiitaP79621 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CiitaP79621 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CiitaP79621 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CiitaP79621 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Gm37022-201ENSMUST00000192517 2254 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Rian-209ENSMUST00000182406 3476 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.1□□□□□ -1.11
CiitaP79621 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.1□□□□□ -1.11
CiitaP79621 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CiitaP79621 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CiitaP79621 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CiitaP79621 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.09□□□□□ -1.11
CiitaP79621 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CiitaP79621 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms