Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 AC155234.1-201ENSMUST00000225610 2823 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm5761-201ENSMUST00000119238 834 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm15763-201ENSMUST00000120136 403 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm9670-201ENSMUST00000121201 540 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Scarna17-201ENSMUST00000158064 79 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm17091-201ENSMUST00000163248 357 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm8696-201ENSMUST00000174777 385 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm28645-201ENSMUST00000185859 564 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC8.52□□□□□ -1.05
Hmgb1P63158 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm44156-201ENSMUST00000203885 1189 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm44245-201ENSMUST00000204304 232 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm4536-201ENSMUST00000209157 542 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm19161-201ENSMUST00000217958 737 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC8.52□□□□□ -1.05
Hmgb1P63158 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.52□□□□□ -1.05
Hmgb1P63158 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Hmgb1P63158 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmgb1P63158 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm13680-201ENSMUST00000119790 793 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm23663-201ENSMUST00000158045 80 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm26977-201ENSMUST00000183151 996 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm45255-201ENSMUST00000209943 811 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm4120-201ENSMUST00000220456 578 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 CT009550.3-201ENSMUST00000228542 455 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.51□□□□□ -1.05
Hmgb1P63158 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hmgb1P63158 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hmgb1P63158 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms