Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Tpm1P58771 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC8.17□□□□□ -1.1
Tpm1P58771 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm37371-201ENSMUST00000194837 392 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm45782-201ENSMUST00000212670 366 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 AC134607.1-201ENSMUST00000214707 485 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC8.17□□□□□ -1.1
Tpm1P58771 AC146596.1-201ENSMUST00000223507 223 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 AC100209.1-201ENSMUST00000225562 409 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 AC142114.1-201ENSMUST00000227724 328 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
Tpm1P58771 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Tpm1P58771 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Tpm1P58771 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.17□□□□□ -1.1
Tpm1P58771 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Tpm1P58771 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Tpm1P58771 Gm24071-201ENSMUST00000104520 132 ntBASIC8.16□□□□□ -1.1
Tpm1P58771 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC8.16□□□□□ -1.1
Tpm1P58771 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Tpm1P58771 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.16□□□□□ -1.1
Tpm1P58771 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.16□□□□□ -1.1
Tpm1P58771 Gm26977-201ENSMUST00000183151 996 ntBASIC8.16□□□□□ -1.1
Tpm1P58771 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.16□□□□□ -1.1
Tpm1P58771 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.16□□□□□ -1.1
Tpm1P58771 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.16□□□□□ -1.1
Tpm1P58771 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC8.16□□□□□ -1.1
Tpm1P58771 Gm2089-201ENSMUST00000218294 479 ntBASIC8.16□□□□□ -1.1
Tpm1P58771 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.16□□□□□ -1.1
Tpm1P58771 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.16□□□□□ -1.1
Tpm1P58771 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC8.16□□□□□ -1.1
Tpm1P58771 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.16□□□□□ -1.1
Tpm1P58771 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Tpm1P58771 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Tpm1P58771 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.15□□□□□ -1.1
Tpm1P58771 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC8.15□□□□□ -1.1
Tpm1P58771 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
Tpm1P58771 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.15□□□□□ -1.1
Tpm1P58771 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.15□□□□□ -1.1
Tpm1P58771 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.15□□□□□ -1.1
Tpm1P58771 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Tpm1P58771 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Gm22271-201ENSMUST00000104035 128 ntBASIC8.15□□□□□ -1.1
Tpm1P58771 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Gm24195-201ENSMUST00000116804 137 ntBASIC8.15□□□□□ -1.1
Tpm1P58771 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.15□□□□□ -1.1
Tpm1P58771 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.15□□□□□ -1.1
Tpm1P58771 Gm14227-201ENSMUST00000119431 629 ntBASIC8.15□□□□□ -1.1
Tpm1P58771 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC8.15□□□□□ -1.1
Tpm1P58771 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Tpm1P58771 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms