Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Rrp1P56183 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Gm11945-201ENSMUST00000120551 476 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Gm17097-201ENSMUST00000166414 714 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.33□□□□□ -1.08
Rrp1P56183 Gm26729-201ENSMUST00000180744 352 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 Gm7436-201ENSMUST00000187229 391 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC8.33□□□□□ -1.08
Rrp1P56183 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 Gm37339-201ENSMUST00000194142 392 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rrp1P56183 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.33□□□□□ -1.08
Rrp1P56183 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rrp1P56183 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rrp1P56183 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rrp1P56183 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Gm6767-201ENSMUST00000118650 1381 ntBASIC8.33□□□□□ -1.08
Rrp1P56183 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rrp1P56183 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rrp1P56183 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Rrp1P56183 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.33□□□□□ -1.08
Rrp1P56183 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Rrp1P56183 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rrp1P56183 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm11969-201ENSMUST00000118848 356 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Gm12599-201ENSMUST00000120534 792 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm22562-201ENSMUST00000157334 111 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Traj54-201ENSMUST00000165071 54 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm43542-201ENSMUST00000199505 379 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Gm43694-201ENSMUST00000200773 1119 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 AC160112.1-201ENSMUST00000219139 714 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.32□□□□□ -1.08
Rrp1P56183 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.32□□□□□ -1.08
Rrp1P56183 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
Rrp1P56183 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rrp1P56183 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rrp1P56183 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm37618-201ENSMUST00000192891 3075 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Rrp1P56183 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Rrp1P56183 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rrp1P56183 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm15913-201ENSMUST00000118492 331 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm14645-201ENSMUST00000118597 417 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm12710-201ENSMUST00000119011 216 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms