Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.4□□□□□ -1.07
Sh3bp1P55194 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm26469-201ENSMUST00000116765 121 ntBASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm13407-201ENSMUST00000118256 360 ntBASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm6798-201ENSMUST00000119961 360 ntBASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm26197-201ENSMUST00000175033 115 ntBASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm23011-202ENSMUST00000197855 275 ntBASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 AC158531.2-201ENSMUST00000224264 473 ntBASIC8.39□□□□□ -1.07
Sh3bp1P55194 AC131586.4-201ENSMUST00000228424 668 ntBASIC8.39□□□□□ -1.07
Sh3bp1P55194 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Sh3bp1P55194 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.39□□□□□ -1.07
Sh3bp1P55194 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm22934-201ENSMUST00000103961 132 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm8644-201ENSMUST00000118619 596 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm11348-201ENSMUST00000118813 318 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm14528-201ENSMUST00000120615 231 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm25845-201ENSMUST00000122588 310 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm5948-201ENSMUST00000219627 839 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 AC134439.2-201ENSMUST00000221950 467 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 AC122533.2-201ENSMUST00000223772 545 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm7493-201ENSMUST00000085919 626 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sh3bp1P55194 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.38□□□□□ -1.07
Sh3bp1P55194 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms