Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm18955-201ENSMUST00000223173 649 ntBASIC9.46□□□□□ -0.9
Msh6P54276 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Msh6P54276 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Msh6P54276 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Msh6P54276 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Msh6P54276 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC9.46□□□□□ -0.9
Msh6P54276 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Msh6P54276 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Gm7265-201ENSMUST00000192735 3502 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Msh6P54276 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Gm13798-201ENSMUST00000118285 139 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Gm12844-201ENSMUST00000119463 582 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Gm13224-201ENSMUST00000119586 94 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC9.45□□□□□ -0.9
Msh6P54276 Gm8046-201ENSMUST00000172151 616 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Gm36928-201ENSMUST00000192466 694 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Gm37325-201ENSMUST00000194971 694 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Gm42782-201ENSMUST00000197286 522 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC9.45□□□□□ -0.9
Msh6P54276 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 AC115304.1-202ENSMUST00000226850 837 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Msh6P54276 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Gm37593-201ENSMUST00000191669 3254 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Gm26945-201ENSMUST00000183191 2011 ntBASIC9.45□□□□□ -0.9
Msh6P54276 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Msh6P54276 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Msh6P54276 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Msh6P54276 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Gm10568-201ENSMUST00000193244 1634 ntBASIC9.44□□□□□ -0.9
Msh6P54276 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC9.44□□□□□ -0.9
Msh6P54276 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC9.44□□□□□ -0.9
Msh6P54276 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Msh6P54276 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC9.44□□□□□ -0.9
Msh6P54276 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Msh6P54276 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Gm18305-201ENSMUST00000216532 2128 ntBASIC9.44□□□□□ -0.9
Msh6P54276 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC9.44□□□□□ -0.9
Msh6P54276 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Msh6P54276 Gm13900-201ENSMUST00000119402 498 ntBASIC9.44□□□□□ -0.9
Msh6P54276 Gm11850-201ENSMUST00000119679 479 ntBASIC9.44□□□□□ -0.9
Msh6P54276 Gm26480-201ENSMUST00000122619 297 ntBASIC9.44□□□□□ -0.9
Msh6P54276 Mir1900-201ENSMUST00000122714 78 ntBASIC9.44□□□□□ -0.9
Msh6P54276 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC9.44□□□□□ -0.9
Msh6P54276 Gm8305-201ENSMUST00000180022 1195 ntBASIC9.44□□□□□ -0.9
Msh6P54276 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC9.44□□□□□ -0.9
Msh6P54276 Gm4972-201ENSMUST00000211108 1254 ntBASIC9.44□□□□□ -0.9
Msh6P54276 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC9.44□□□□□ -0.9
Msh6P54276 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Gm5446-201ENSMUST00000091762 784 ntBASIC9.44□□□□□ -0.9
Msh6P54276 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Msh6P54276 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Gm10388-201ENSMUST00000205001 2936 ntBASIC9.44□□□□□ -0.9
Msh6P54276 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Msh6P54276 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Msh6P54276 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Msh6P54276 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Gm45182-201ENSMUST00000207579 2404 ntBASIC9.43□□□□□ -0.9
Msh6P54276 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Msh6P54276 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Gm2108-201ENSMUST00000165058 2177 ntBASIC9.43□□□□□ -0.9
Msh6P54276 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Msh6P54276 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Gm14863-201ENSMUST00000119648 307 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms