Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 Nup210l-201ENSMUST00000029548 5681 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC9.71□□□□□ -0.85
Col18a1P39061 Gm3822-201ENSMUST00000201941 2935 ntBASIC9.71□□□□□ -0.85
Col18a1P39061 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Col18a1P39061 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Col18a1P39061 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC9.71□□□□□ -0.85
Col18a1P39061 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Col18a1P39061 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC9.71□□□□□ -0.85
Col18a1P39061 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC9.71□□□□□ -0.85
Col18a1P39061 Gm27005-201ENSMUST00000182783 921 ntBASIC9.71□□□□□ -0.85
Col18a1P39061 Gm28846-201ENSMUST00000189161 368 ntBASIC9.71□□□□□ -0.85
Col18a1P39061 Gm37285-201ENSMUST00000194465 1139 ntBASIC9.71□□□□□ -0.85
Col18a1P39061 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC9.71□□□□□ -0.85
Col18a1P39061 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC9.71□□□□□ -0.85
Col18a1P39061 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC9.71□□□□□ -0.85
Col18a1P39061 Gm2774-201ENSMUST00000213650 1165 ntBASIC9.71□□□□□ -0.85
Col18a1P39061 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC9.71□□□□□ -0.85
Col18a1P39061 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Col18a1P39061 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC9.71□□□□□ -0.85
Col18a1P39061 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Col18a1P39061 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col18a1P39061 Trim9-203ENSMUST00000167755 4559 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col18a1P39061 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC9.71□□□□□ -0.86
Col18a1P39061 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC9.71□□□□□ -0.86
Col18a1P39061 Mbnl2-203ENSMUST00000226800 3328 ntBASIC9.71□□□□□ -0.86
Col18a1P39061 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col18a1P39061 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Col18a1P39061 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Col18a1P39061 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col18a1P39061 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Col18a1P39061 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Col18a1P39061 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Col18a1P39061 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col18a1P39061 Gm42514-201ENSMUST00000196636 1832 ntBASIC9.71□□□□□ -0.86
Col18a1P39061 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col18a1P39061 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col18a1P39061 Gm6493-201ENSMUST00000159889 1786 ntBASIC9.71□□□□□ -0.86
Col18a1P39061 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col18a1P39061 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm13878-201ENSMUST00000117986 577 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Mup-ps16-201ENSMUST00000120085 596 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm9428-201ENSMUST00000127214 769 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC9.7□□□□□ -0.86
Col18a1P39061 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm28952-201ENSMUST00000189285 681 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm18699-201ENSMUST00000190713 243 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm37841-201ENSMUST00000195367 376 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm43867-201ENSMUST00000203860 525 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 AC132474.1-201ENSMUST00000214407 3686 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Col18a1P39061 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Dpp6-202ENSMUST00000101471 4491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm14579-201ENSMUST00000117068 283 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm15216-201ENSMUST00000118058 277 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm15709-201ENSMUST00000118354 213 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm13702-201ENSMUST00000118542 825 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm12438-201ENSMUST00000122034 336 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms