Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sdc1P18828 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Sdc1P18828 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Sdc1P18828 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm43497-201ENSMUST00000201137 2316 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 AC160138.2-201ENSMUST00000220255 1531 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm37210-201ENSMUST00000192484 2004 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Sdc1P18828 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sdc1P18828 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Mir671-201ENSMUST00000102432 98 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm25762-201ENSMUST00000103984 132 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm25803-201ENSMUST00000104419 131 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm14016-201ENSMUST00000119095 486 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm12917-201ENSMUST00000119850 639 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm6689-201ENSMUST00000130905 481 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm15646-201ENSMUST00000143317 766 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm24011-201ENSMUST00000157732 268 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm24298-201ENSMUST00000158299 60 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm22669-201ENSMUST00000158723 318 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm17157-201ENSMUST00000172397 348 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm25735-201ENSMUST00000175164 215 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm38247-201ENSMUST00000194675 433 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 AC162893.1-201ENSMUST00000207732 1085 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm45739-201ENSMUST00000213094 388 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.94□□□□□ -1.46
Sdc1P18828 AC124196.1-201ENSMUST00000225970 1032 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Tmem14a-201ENSMUST00000027064 1261 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sdc1P18828 Olfr120-201ENSMUST00000077498 993 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sdc1P18828 1110019D14Rik-202ENSMUST00000181225 1499 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm6679-201ENSMUST00000191467 1869 ntBASIC5.94□□□□□ -1.46
Sdc1P18828 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Sdc1P18828 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sdc1P18828 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms