Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm22470-201ENSMUST00000104117 130 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm16044-201ENSMUST00000118475 450 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm11343-201ENSMUST00000120579 599 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm10157-201ENSMUST00000139408 343 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.39□□□□□ -1.23
Hoxa4P06798 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm7502-201ENSMUST00000169235 733 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Mir3078-201ENSMUST00000175231 87 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm18254-201ENSMUST00000185699 1204 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.39□□□□□ -1.23
Hoxa4P06798 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm19035-202ENSMUST00000194575 959 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm44760-201ENSMUST00000206375 1173 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC7.39□□□□□ -1.23
Hoxa4P06798 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.39□□□□□ -1.23
Hoxa4P06798 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Hoxa4P06798 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Hoxa4P06798 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.39□□□□□ -1.23
Hoxa4P06798 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm5752-201ENSMUST00000117771 594 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm24893-201ENSMUST00000122745 369 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm24139-201ENSMUST00000122780 288 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm24923-201ENSMUST00000178201 88 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 Mir6403-201ENSMUST00000185007 129 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm43812-202ENSMUST00000202701 581 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm18690-201ENSMUST00000204488 985 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Olfr890-201ENSMUST00000079804 945 ntBASIC7.38□□□□□ -1.23
Hoxa4P06798 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hoxa4P06798 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hoxa4P06798 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hoxa4P06798 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC7.37□□□□□ -1.23
Hoxa4P06798 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hoxa4P06798 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.37□□□□□ -1.23
Hoxa4P06798 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.37□□□□□ -1.23
Hoxa4P06798 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.37□□□□□ -1.23
Hoxa4P06798 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Hoxa4P06798 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hoxa4P06798 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.37□□□□□ -1.23
Hoxa4P06798 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hoxa4P06798 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Hoxa4P06798 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hoxa4P06798 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hoxa4P06798 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hoxa4P06798 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms