Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC5.99□□□□□ -1.45
P04940 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC5.99□□□□□ -1.45
P04940 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC5.99□□□□□ -1.45
P04940 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
P04940 Gm45887-201ENSMUST00000212672 2998 ntBASIC5.99□□□□□ -1.45
P04940 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
P04940 Gm45512-201ENSMUST00000210432 1553 ntBASIC5.99□□□□□ -1.45
P04940 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Gm37483-201ENSMUST00000194382 1484 ntBASIC5.99□□□□□ -1.45
P04940 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC5.99□□□□□ -1.45
P04940 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Gm25725-201ENSMUST00000104528 130 ntBASIC5.99□□□□□ -1.45
P04940 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Gm6491-201ENSMUST00000118273 990 ntBASIC5.99□□□□□ -1.45
P04940 Gm11850-201ENSMUST00000119679 479 ntBASIC5.99□□□□□ -1.45
P04940 Gm12124-201ENSMUST00000120504 679 ntBASIC5.99□□□□□ -1.45
P04940 Gm11259-201ENSMUST00000120554 715 ntBASIC5.99□□□□□ -1.45
P04940 Gm11954-201ENSMUST00000121403 349 ntBASIC5.99□□□□□ -1.45
P04940 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC5.99□□□□□ -1.45
P04940 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC5.99□□□□□ -1.45
P04940 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC5.99□□□□□ -1.45
P04940 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
P04940 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
P04940 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC5.99□□□□□ -1.45
P04940 Ighv1-38-201ENSMUST00000192755 349 ntBASIC5.99□□□□□ -1.45
P04940 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Gm5708-201ENSMUST00000196289 886 ntBASIC5.99□□□□□ -1.45
P04940 Gm43212-201ENSMUST00000198208 394 ntBASIC5.99□□□□□ -1.45
P04940 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC5.99□□□□□ -1.45
P04940 Gm42965-201ENSMUST00000201254 250 ntBASIC5.99□□□□□ -1.45
P04940 Gm45478-201ENSMUST00000209472 211 ntBASIC5.99□□□□□ -1.45
P04940 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC5.99□□□□□ -1.45
P04940 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC5.99□□□□□ -1.45
P04940 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC5.99□□□□□ -1.45
P04940 AC163651.1-201ENSMUST00000222500 372 ntBASIC5.99□□□□□ -1.45
P04940 AC154461.4-201ENSMUST00000224878 468 ntBASIC5.99□□□□□ -1.45
P04940 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Gm37785-201ENSMUST00000195783 2408 ntBASIC5.99□□□□□ -1.45
P04940 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Gm26945-201ENSMUST00000183191 2011 ntBASIC5.99□□□□□ -1.45
P04940 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC5.99□□□□□ -1.45
P04940 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
P04940 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC5.99□□□□□ -1.45
P04940 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC5.99□□□□□ -1.45
P04940 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC5.99□□□□□ -1.45
P04940 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC5.99□□□□□ -1.45
P04940 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
P04940 AC123705.1-201ENSMUST00000222512 2058 ntBASIC5.98□□□□□ -1.45
P04940 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.98□□□□□ -1.45
P04940 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC5.98□□□□□ -1.45
P04940 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC5.98□□□□□ -1.45
P04940 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
P04940 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
P04940 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Gm22439-201ENSMUST00000104048 132 ntBASIC5.98□□□□□ -1.45
P04940 Gm25276-201ENSMUST00000104300 124 ntBASIC5.98□□□□□ -1.45
P04940 Gm7831-201ENSMUST00000117990 552 ntBASIC5.98□□□□□ -1.45
P04940 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC5.98□□□□□ -1.45
P04940 Gm8662-201ENSMUST00000118644 574 ntBASIC5.98□□□□□ -1.45
P04940 Gm12710-201ENSMUST00000119011 216 ntBASIC5.98□□□□□ -1.45
P04940 Gm12219-201ENSMUST00000119198 443 ntBASIC5.98□□□□□ -1.45
P04940 Gm11320-201ENSMUST00000119434 463 ntBASIC5.98□□□□□ -1.45
P04940 Gm14202-201ENSMUST00000120121 311 ntBASIC5.98□□□□□ -1.45
P04940 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
P04940 Gm12920-201ENSMUST00000121818 1186 ntBASIC5.98□□□□□ -1.45
P04940 Gm5970-201ENSMUST00000131638 1216 ntBASIC5.98□□□□□ -1.45
P04940 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC5.98□□□□□ -1.45
P04940 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC5.98□□□□□ -1.45
P04940 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC5.98□□□□□ -1.45
P04940 Gm16027-201ENSMUST00000161618 758 ntBASIC5.98□□□□□ -1.45
P04940 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
P04940 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
P04940 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms