Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm18504-201ENSMUST00000220917 929 ntBASIC5.39□□□□□ -1.55
TcraP01849 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TcraP01849 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC5.39□□□□□ -1.55
TcraP01849 AC132468.1-201ENSMUST00000224706 499 ntBASIC5.39□□□□□ -1.55
TcraP01849 AC122774.1-201ENSMUST00000227703 762 ntBASIC5.39□□□□□ -1.55
TcraP01849 CT009550.2-201ENSMUST00000228851 399 ntBASIC5.39□□□□□ -1.55
TcraP01849 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TcraP01849 Gm24696-201ENSMUST00000083878 134 ntBASIC5.39□□□□□ -1.55
TcraP01849 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TcraP01849 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TcraP01849 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Gm13456-201ENSMUST00000118928 1365 ntBASIC5.39□□□□□ -1.55
TcraP01849 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.39□□□□□ -1.55
TcraP01849 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TcraP01849 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
TcraP01849 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Gm45088-201ENSMUST00000207066 1408 ntBASIC5.39□□□□□ -1.55
TcraP01849 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TcraP01849 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC5.39□□□□□ -1.55
TcraP01849 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.39□□□□□ -1.55
TcraP01849 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
TcraP01849 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TcraP01849 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.38□□□□□ -1.55
TcraP01849 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 AC122346.1-201ENSMUST00000225266 3732 ntBASIC5.38□□□□□ -1.55
TcraP01849 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
TcraP01849 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TcraP01849 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
TcraP01849 Gm11922-201ENSMUST00000118967 475 ntBASIC5.38□□□□□ -1.55
TcraP01849 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC5.38□□□□□ -1.55
TcraP01849 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC5.38□□□□□ -1.55
TcraP01849 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC5.38□□□□□ -1.55
TcraP01849 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TcraP01849 Gm17157-201ENSMUST00000172397 348 ntBASIC5.38□□□□□ -1.55
TcraP01849 Mir3078-201ENSMUST00000175231 87 ntBASIC5.38□□□□□ -1.55
TcraP01849 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC5.38□□□□□ -1.55
TcraP01849 Gm8524-201ENSMUST00000186232 379 ntBASIC5.38□□□□□ -1.55
TcraP01849 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC5.38□□□□□ -1.55
TcraP01849 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC5.38□□□□□ -1.55
TcraP01849 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC5.38□□□□□ -1.55
TcraP01849 Gm3774-201ENSMUST00000209773 435 ntBASIC5.38□□□□□ -1.55
TcraP01849 Gm5609-201ENSMUST00000210008 1267 ntBASIC5.38□□□□□ -1.55
TcraP01849 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC5.38□□□□□ -1.55
TcraP01849 Gm7727-201ENSMUST00000219830 671 ntBASIC5.38□□□□□ -1.55
TcraP01849 Gm7986-201ENSMUST00000221336 551 ntBASIC5.38□□□□□ -1.55
TcraP01849 CT033774.2-201ENSMUST00000222079 256 ntBASIC5.38□□□□□ -1.55
TcraP01849 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 AC158954.1-201ENSMUST00000228272 1006 ntBASIC5.38□□□□□ -1.55
TcraP01849 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TcraP01849 Gm8623-201ENSMUST00000071573 436 ntBASIC5.38□□□□□ -1.55
TcraP01849 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TcraP01849 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TcraP01849 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
TcraP01849 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Gm44834-201ENSMUST00000206671 1396 ntBASIC5.38□□□□□ -1.55
TcraP01849 AC123665.5-201ENSMUST00000226648 1392 ntBASIC5.38□□□□□ -1.55
TcraP01849 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Gm43728-201ENSMUST00000198817 2622 ntBASIC5.38□□□□□ -1.55
TcraP01849 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TcraP01849 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TcraP01849 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TcraP01849 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms