Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Dennd6a-205ENSMUST00000224378 2424 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Olfr923-203ENSMUST00000213619 2846 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm22599-201ENSMUST00000157597 132 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm9597-201ENSMUST00000171913 602 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm45850-201ENSMUST00000212536 338 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm19212-201ENSMUST00000216642 862 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm7768-201ENSMUST00000222988 597 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm35725-201ENSMUST00000221862 2800 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Ldlr-202ENSMUST00000213114 4318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm12808-201ENSMUST00000120597 404 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm23662-201ENSMUST00000158046 111 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm37196-201ENSMUST00000194762 906 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Tbc1d24-214ENSMUST00000201960 4305 ntTSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Cldn34c1-202ENSMUST00000113348 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm42981-201ENSMUST00000200184 3252 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm13622-201ENSMUST00000120658 433 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm5353-201ENSMUST00000139800 793 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm13548-201ENSMUST00000144688 385 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm26950-201ENSMUST00000182734 498 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 AC171003.1-201ENSMUST00000221667 1665 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm42608-201ENSMUST00000197563 2018 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm22778-201ENSMUST00000104090 128 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm15560-201ENSMUST00000117107 643 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm16164-201ENSMUST00000160078 468 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm45750-201ENSMUST00000211966 354 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms