Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Olfr888-201ENSMUST00000075228 945 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm45251-201ENSMUST00000209486 1465 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 AC132384.7-201ENSMUST00000220198 1391 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 AC154576.1-202ENSMUST00000223966 3320 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm16221-201ENSMUST00000117331 393 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm11295-201ENSMUST00000121379 803 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm23007-201ENSMUST00000158951 177 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Traj54-201ENSMUST00000165071 54 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm17129-201ENSMUST00000168168 505 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm22408-201ENSMUST00000174925 65 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm23164-201ENSMUST00000175084 111 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Mir6403-201ENSMUST00000185007 129 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm37247-201ENSMUST00000192549 730 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm42431-201ENSMUST00000196880 323 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm30694-201ENSMUST00000209278 1230 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Olfr1255-201ENSMUST00000057369 933 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc38Q8CDN8 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Gm38195-201ENSMUST00000194247 1499 ntBASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Gm24071-201ENSMUST00000104520 132 ntBASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Gm14891-201ENSMUST00000117378 596 ntBASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc38Q8CDN8 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms