Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Gm5605-201ENSMUST00000208940 1305 ntBASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim9Q8C7M3 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm12344-201ENSMUST00000117087 329 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm15481-201ENSMUST00000120264 539 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm22795-201ENSMUST00000157233 118 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm20797-201ENSMUST00000177894 383 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm5181-201ENSMUST00000183140 971 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm43037-201ENSMUST00000196808 250 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm44471-201ENSMUST00000197963 100 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm43235-201ENSMUST00000200121 297 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm4270-201ENSMUST00000209666 406 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm24613-201ENSMUST00000083266 130 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim9Q8C7M3 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm15576-201ENSMUST00000117806 583 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm5759-201ENSMUST00000119203 811 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Mir6409-201ENSMUST00000184957 92 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Txn-ps1-201ENSMUST00000186385 309 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Gm37295-201ENSMUST00000192186 109 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim9Q8C7M3 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.16□□□□□ -1.1
Trim9Q8C7M3 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms