Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm15778-201ENSMUST00000118469 608 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm5133-201ENSMUST00000118940 1255 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm13444-201ENSMUST00000119445 522 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm13735-201ENSMUST00000120217 670 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Mir3085-201ENSMUST00000175493 89 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm27542-201ENSMUST00000184184 256 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm42584-201ENSMUST00000201404 220 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm44590-201ENSMUST00000206161 391 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm7239-201ENSMUST00000220981 860 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 AC121804.1-201ENSMUST00000221016 394 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm40853-201ENSMUST00000221342 582 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm9249-201ENSMUST00000221420 578 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 AC211878.5-201ENSMUST00000221697 409 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm9255-201ENSMUST00000223225 581 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Otop1Q80VM9 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 AC106830.2-201ENSMUST00000226624 943 ntBASIC7.4□□□□□ -1.22
Otop1Q80VM9 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Otop1Q80VM9 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Otop1Q80VM9 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
Otop1Q80VM9 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.4□□□□□ -1.23
Otop1Q80VM9 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Otop1Q80VM9 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Otop1Q80VM9 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Otop1Q80VM9 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.4□□□□□ -1.23
Otop1Q80VM9 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm24048-201ENSMUST00000102411 106 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm25344-201ENSMUST00000104503 132 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm14248-201ENSMUST00000117790 544 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm23657-201ENSMUST00000122623 294 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm26353-201ENSMUST00000158224 255 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm6264-201ENSMUST00000160802 624 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm10012-202ENSMUST00000170379 372 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm5698-201ENSMUST00000178317 724 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm26738-201ENSMUST00000181312 601 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm5244-202ENSMUST00000189517 743 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm29747-201ENSMUST00000194764 585 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm27680-202ENSMUST00000199221 807 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm45198-201ENSMUST00000206796 591 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm9604-201ENSMUST00000211175 433 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 AC174678.3-201ENSMUST00000227568 362 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 AC167013.3-201ENSMUST00000228110 989 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm24613-201ENSMUST00000083266 130 ntBASIC7.39□□□□□ -1.23
Otop1Q80VM9 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC7.39□□□□□ -1.23
Otop1Q80VM9 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 139.2 ms