Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm18469-201ENSMUST00000208850 439 ntBASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Gm4898-201ENSMUST00000218519 832 ntBASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smarcd3Q6P9Z1 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Smarcd3Q6P9Z1 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Smarcd3Q6P9Z1 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Smarcd3Q6P9Z1 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm7785-201ENSMUST00000117121 892 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm15422-201ENSMUST00000117453 541 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm11969-201ENSMUST00000118848 356 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm9399-201ENSMUST00000175771 639 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm26736-201ENSMUST00000180425 1236 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Mir6340-201ENSMUST00000183857 119 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Mir6403-201ENSMUST00000185007 129 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Mir6919-201ENSMUST00000185146 62 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm37481-201ENSMUST00000195176 403 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm44833-201ENSMUST00000208368 331 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm45432-201ENSMUST00000210391 416 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcd3Q6P9Z1 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 AC159264.1-202ENSMUST00000224856 3162 ntBASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcd3Q6P9Z1 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms