Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NcanP55066 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NcanP55066 Gm25498-201ENSMUST00000104424 129 ntBASIC7.98□□□□□ -1.13
NcanP55066 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
NcanP55066 Gm8424-201ENSMUST00000117716 988 ntBASIC7.98□□□□□ -1.13
NcanP55066 Gm14893-201ENSMUST00000117904 282 ntBASIC7.98□□□□□ -1.13
NcanP55066 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
NcanP55066 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NcanP55066 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.98□□□□□ -1.13
NcanP55066 Gm16112-201ENSMUST00000159075 382 ntBASIC7.98□□□□□ -1.13
NcanP55066 Gm17022-201ENSMUST00000166415 922 ntBASIC7.98□□□□□ -1.13
NcanP55066 Gm3208-201ENSMUST00000168281 427 ntBASIC7.98□□□□□ -1.13
NcanP55066 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC7.98□□□□□ -1.13
NcanP55066 Gm15257-201ENSMUST00000177680 883 ntBASIC7.98□□□□□ -1.13
NcanP55066 Gm15252-201ENSMUST00000177750 883 ntBASIC7.98□□□□□ -1.13
NcanP55066 Gm15256-201ENSMUST00000177793 883 ntBASIC7.98□□□□□ -1.13
NcanP55066 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.98□□□□□ -1.13
NcanP55066 Gm15260-201ENSMUST00000179402 883 ntBASIC7.98□□□□□ -1.13
NcanP55066 Mir7211-201ENSMUST00000184071 63 ntBASIC7.98□□□□□ -1.13
NcanP55066 Gm37439-201ENSMUST00000193150 856 ntBASIC7.98□□□□□ -1.13
NcanP55066 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.98□□□□□ -1.13
NcanP55066 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NcanP55066 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.98□□□□□ -1.13
NcanP55066 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.98□□□□□ -1.13
NcanP55066 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
NcanP55066 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NcanP55066 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NcanP55066 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NcanP55066 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC7.98□□□□□ -1.13
NcanP55066 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NcanP55066 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC7.98□□□□□ -1.13
NcanP55066 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NcanP55066 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
NcanP55066 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC7.98□□□□□ -1.13
NcanP55066 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NcanP55066 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NcanP55066 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
NcanP55066 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.98□□□□□ -1.13
NcanP55066 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NcanP55066 Gm37159-201ENSMUST00000192720 3605 ntBASIC7.98□□□□□ -1.13
NcanP55066 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NcanP55066 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NcanP55066 Gm7435-202ENSMUST00000216003 2424 ntBASIC7.98□□□□□ -1.13
NcanP55066 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
NcanP55066 CT009711.1-201ENSMUST00000223992 3040 ntBASIC7.97□□□□□ -1.13
NcanP55066 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.97□□□□□ -1.13
NcanP55066 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
NcanP55066 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm42656-201ENSMUST00000201506 2305 ntBASIC7.97□□□□□ -1.13
NcanP55066 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm44437-201ENSMUST00000203832 4038 ntBASIC7.97□□□□□ -1.13
NcanP55066 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
NcanP55066 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 CT025642.3-201ENSMUST00000225503 4086 ntBASIC7.97□□□□□ -1.13
NcanP55066 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Gm15128-201ENSMUST00000112814 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 n-R5s1-201ENSMUST00000101925 119 ntBASIC7.97□□□□□ -1.13
NcanP55066 Gm22256-201ENSMUST00000102291 107 ntBASIC7.97□□□□□ -1.13
NcanP55066 Gm11462-201ENSMUST00000117749 562 ntBASIC7.97□□□□□ -1.13
NcanP55066 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.97□□□□□ -1.13
NcanP55066 Gm8421-201ENSMUST00000119439 305 ntBASIC7.97□□□□□ -1.13
NcanP55066 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC7.97□□□□□ -1.13
NcanP55066 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC7.97□□□□□ -1.13
NcanP55066 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.97□□□□□ -1.13
NcanP55066 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.97□□□□□ -1.13
NcanP55066 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.97□□□□□ -1.13
NcanP55066 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.97□□□□□ -1.13
NcanP55066 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.97□□□□□ -1.13
NcanP55066 CT009733.1-202ENSMUST00000224941 441 ntBASIC7.97□□□□□ -1.13
NcanP55066 Olfr683-201ENSMUST00000061284 960 ntBASIC7.97□□□□□ -1.13
NcanP55066 Gm23734-201ENSMUST00000083753 109 ntBASIC7.97□□□□□ -1.13
NcanP55066 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.97□□□□□ -1.13
NcanP55066 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms