Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 AC160637.1-201ENSMUST00000214037 3887 ntBASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 AC154347.1-201ENSMUST00000221358 3105 ntBASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Gm37199-201ENSMUST00000193881 4065 ntBASIC7.61□□□□□ -1.19
Col4a6B1AVK5 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.61□□□□□ -1.19
Col4a6B1AVK5 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.61□□□□□ -1.19
Col4a6B1AVK5 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Gm37962-201ENSMUST00000195535 2034 ntBASIC7.61□□□□□ -1.19
Col4a6B1AVK5 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col4a6B1AVK5 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm12451-201ENSMUST00000121636 633 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 AC134917.2-201ENSMUST00000223354 124 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm44883-201ENSMUST00000206063 3258 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm22256-201ENSMUST00000102291 107 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm14116-201ENSMUST00000117733 805 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm15349-201ENSMUST00000121154 204 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm26323-201ENSMUST00000157743 175 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm9672-201ENSMUST00000166437 425 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm6004-201ENSMUST00000173237 1116 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm23450-201ENSMUST00000178285 91 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm37189-201ENSMUST00000192131 298 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm38068-201ENSMUST00000192546 540 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm18995-201ENSMUST00000202981 520 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col4a6B1AVK5 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms