Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm12402-201ENSMUST00000120536 334 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm14728-201ENSMUST00000122196 492 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm2619-202ENSMUST00000166777 651 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Mir6409-201ENSMUST00000184957 92 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm43471-201ENSMUST00000197550 467 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm40853-201ENSMUST00000221342 582 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm9255-201ENSMUST00000223225 581 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Scrt1Q99M85 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
Scrt1Q99M85 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Scrt1Q99M85 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.65□□□□□ -1.35
Scrt1Q99M85 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.65□□□□□ -1.35
Scrt1Q99M85 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm37785-201ENSMUST00000195783 2408 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm25344-201ENSMUST00000104503 132 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm13255-201ENSMUST00000117255 547 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm13414-201ENSMUST00000117516 727 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm15574-201ENSMUST00000119937 405 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm14489-201ENSMUST00000120868 901 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm8089-201ENSMUST00000122463 968 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm25660-201ENSMUST00000158470 104 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm5698-201ENSMUST00000178317 724 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm6100-201ENSMUST00000180253 403 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Mir6357-201ENSMUST00000184246 104 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm37469-201ENSMUST00000193728 890 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Mir7b-201ENSMUST00000083557 111 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm37675-201ENSMUST00000192303 2847 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms