Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm24002-201ENSMUST00000158456 104 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm25839-201ENSMUST00000158921 103 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm3123-201ENSMUST00000163480 480 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm28934-201ENSMUST00000186491 346 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm37700-201ENSMUST00000192617 965 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Ighv5-5-201ENSMUST00000193826 329 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm19065-202ENSMUST00000203910 1165 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm44128-201ENSMUST00000204909 219 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm18585-201ENSMUST00000215197 556 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 AC153968.1-201ENSMUST00000215584 334 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 AC153526.1-201ENSMUST00000219750 190 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 AC118230.1-201ENSMUST00000220196 656 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 AC154738.1-201ENSMUST00000227054 368 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm5120-201ENSMUST00000215231 2414 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Pygb-201ENSMUST00000045441 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 4930543N07Rik-201ENSMUST00000209357 1364 ntTSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Limk2-204ENSMUST00000110029 2939 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Brinp3-205ENSMUST00000166814 2760 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Nipal4-201ENSMUST00000020679 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm7869-201ENSMUST00000121457 1322 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Olfr554-203ENSMUST00000215995 2515 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Prickle2-202ENSMUST00000113445 3708 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Rnf6-208ENSMUST00000169407 3276 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm44013-201ENSMUST00000204392 2262 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Lpin1-205ENSMUST00000221297 3100 ntAPPRIS P4 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Numb-201ENSMUST00000021647 1815 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm25396-201ENSMUST00000103981 133 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm15047-201ENSMUST00000118891 454 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm11797-201ENSMUST00000121336 754 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm21430-201ENSMUST00000182998 998 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm27156-201ENSMUST00000184589 754 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm8407-201ENSMUST00000192719 427 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms