Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm46311-201ENSMUST00000217971 203 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm20302-201ENSMUST00000080671 275 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm37067-201ENSMUST00000195730 1628 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 AC107757.2-201ENSMUST00000226370 1466 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC8.81□□□□□ -1
Vps53Q8CCB4 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm13915-201ENSMUST00000119314 931 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm11809-201ENSMUST00000120923 950 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC8.81□□□□□ -1
Vps53Q8CCB4 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm28195-201ENSMUST00000186992 372 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm28923-201ENSMUST00000187755 322 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm18943-201ENSMUST00000207357 1216 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm18503-201ENSMUST00000220340 728 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 AC107452.2-201ENSMUST00000228415 363 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 AC154838.3-201ENSMUST00000228876 965 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm5514-201ENSMUST00000060477 306 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.81□□□□□ -1
Vps53Q8CCB4 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC8.81□□□□□ -1
Vps53Q8CCB4 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.81□□□□□ -1
Vps53Q8CCB4 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Vps53Q8CCB4 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps53Q8CCB4 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Vps53Q8CCB4 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm14201-201ENSMUST00000117627 289 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm12851-201ENSMUST00000117920 421 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm13858-201ENSMUST00000118862 671 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm12955-201ENSMUST00000119689 957 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm22025-201ENSMUST00000122734 302 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm23639-201ENSMUST00000175078 132 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm5698-201ENSMUST00000178317 724 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm28864-201ENSMUST00000189251 644 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm36932-201ENSMUST00000195226 929 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm18559-201ENSMUST00000208249 604 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm45900-201ENSMUST00000211879 409 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 AC164550.1-201ENSMUST00000217821 1066 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.8□□□□□ -1
Vps53Q8CCB4 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.8□□□□□ -1
Vps53Q8CCB4 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Olfr120-201ENSMUST00000077498 993 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.8□□□□□ -1
Vps53Q8CCB4 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm44441-201ENSMUST00000203642 2475 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.8□□□□□ -1
Vps53Q8CCB4 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.8□□□□□ -1
Vps53Q8CCB4 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms