Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Gm5125-201ENSMUST00000148614 624 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.23□□□□□ -1.09
Sox1P53783 Gm23441-201ENSMUST00000157268 127 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Gm22518-201ENSMUST00000158267 68 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Gm16026-205ENSMUST00000162923 641 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Glyatl3-201ENSMUST00000166343 873 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Gm18808-201ENSMUST00000173316 462 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Sox1P53783 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Sox1P53783 Gm5350-201ENSMUST00000182057 1002 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Mir7020-201ENSMUST00000183787 70 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Mir6409-201ENSMUST00000184957 92 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Ly6a-202ENSMUST00000186526 862 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Sox1P53783 Gm28580-201ENSMUST00000186767 88 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Gm42708-201ENSMUST00000196332 905 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Gm44988-201ENSMUST00000203835 1161 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Gm33778-201ENSMUST00000216884 704 ntBASIC8.23□□□□□ -1.09
Sox1P53783 AC211878.5-201ENSMUST00000221697 409 ntBASIC8.23□□□□□ -1.09
Sox1P53783 AC134917.2-201ENSMUST00000223354 124 ntBASIC8.23□□□□□ -1.09
Sox1P53783 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.23□□□□□ -1.09
Sox1P53783 CT009556.2-201ENSMUST00000227980 1123 ntBASIC8.23□□□□□ -1.09
Sox1P53783 AC171241.2-201ENSMUST00000228744 892 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Gm5111-201ENSMUST00000064744 964 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Desi2-202ENSMUST00000069568 1193 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Sox1P53783 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Sox1P53783 Ccdc162-211ENSMUST00000190522 1810 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Mrpl15-206ENSMUST00000156816 4203 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Gm45718-201ENSMUST00000207577 3794 ntBASIC8.23□□□□□ -1.09
Sox1P53783 4930509G22Rik-201ENSMUST00000181206 2481 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Cd22-202ENSMUST00000108125 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 AC155270.1-201ENSMUST00000221626 4028 ntBASIC8.23□□□□□ -1.09
Sox1P53783 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Gm16026-206ENSMUST00000163068 2741 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Kif18b-201ENSMUST00000021311 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC8.22□□□□□ -1.09
Sox1P53783 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Sox1P53783 Gm26562-201ENSMUST00000181113 2010 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Tbccd1-201ENSMUST00000004576 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Rpap2-203ENSMUST00000112651 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Gm22370-201ENSMUST00000102422 83 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm25877-201ENSMUST00000104326 129 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm22374-201ENSMUST00000104583 132 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC8.22□□□□□ -1.09
Sox1P53783 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Gm14279-201ENSMUST00000117142 332 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm10243-201ENSMUST00000117571 333 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm11810-201ENSMUST00000118311 333 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm12687-201ENSMUST00000119752 706 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm12877-201ENSMUST00000120383 510 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm15316-201ENSMUST00000121082 421 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm13358-201ENSMUST00000121427 569 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC8.22□□□□□ -1.09
Sox1P53783 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Gm23018-201ENSMUST00000177928 109 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm23450-201ENSMUST00000178285 91 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Gm29273-201ENSMUST00000188880 262 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm17867-201ENSMUST00000188981 391 ntBASIC8.22□□□□□ -1.09
Sox1P53783 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.22□□□□□ -1.09
Sox1P53783 Gm19066-201ENSMUST00000193232 1078 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC8.22□□□□□ -1.09
Sox1P53783 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms