Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm23835-201ENSMUST00000104439 132 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Anapc15-205ENSMUST00000106978 841 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm13325-201ENSMUST00000118746 806 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm13674-201ENSMUST00000121276 823 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm5270-201ENSMUST00000121506 1002 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm25265-201ENSMUST00000158520 347 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm26211-201ENSMUST00000158578 129 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm24838-201ENSMUST00000158684 130 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Cyb5a-205ENSMUST00000163083 676 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm17097-201ENSMUST00000166414 714 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Zfp738-204ENSMUST00000175678 609 ntTSL 2 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm26929-201ENSMUST00000182703 753 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Scgb2b30-201ENSMUST00000187013 336 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdx1P18111 Scgb2b10-201ENSMUST00000191403 318 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm43805-201ENSMUST00000198488 824 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm42489-201ENSMUST00000198964 669 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm43694-201ENSMUST00000200773 1119 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm42959-201ENSMUST00000202184 212 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm4270-201ENSMUST00000209666 406 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdx1P18111 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 AC154760.1-201ENSMUST00000227218 673 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Olfr214-201ENSMUST00000060204 1008 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx1P18111 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm22865-201ENSMUST00000083949 214 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Gm10540-201ENSMUST00000097581 276 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm43149-201ENSMUST00000198162 1422 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 4930533K18Rik-203ENSMUST00000219192 1307 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cdx1P18111 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm25502-201ENSMUST00000104428 131 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm11933-201ENSMUST00000121550 375 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm13024-201ENSMUST00000121756 718 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm11897-201ENSMUST00000121976 828 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm24004-201ENSMUST00000158460 178 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdx1P18111 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Mrgprc7-ps-201ENSMUST00000187169 952 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm28546-201ENSMUST00000188221 615 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdx1P18111 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm43560-201ENSMUST00000198100 773 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gabra4-203ENSMUST00000198138 440 ntTSL 2 BASIC6.1□□□□□ -1.43
Cdx1P18111 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm43797-201ENSMUST00000198221 532 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms