Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm21036-201ENSMUST00000207544 2611 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm12838-201ENSMUST00000116278 325 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm13682-201ENSMUST00000117524 702 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm13526-201ENSMUST00000117970 189 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm13313-201ENSMUST00000118938 1084 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC5.41□□□□□ -1.54
TcraP01849 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC5.41□□□□□ -1.54
TcraP01849 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC5.41□□□□□ -1.54
TcraP01849 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TcraP01849 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm8877-201ENSMUST00000172657 655 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm23413-201ENSMUST00000175521 125 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
TcraP01849 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
TcraP01849 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC5.41□□□□□ -1.54
TcraP01849 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC5.41□□□□□ -1.54
TcraP01849 Gm17530-201ENSMUST00000194336 472 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC5.41□□□□□ -1.54
TcraP01849 Gm42964-201ENSMUST00000202965 382 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC5.41□□□□□ -1.54
TcraP01849 Gm45401-201ENSMUST00000209456 733 ntBASIC5.41□□□□□ -1.54
TcraP01849 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC5.41□□□□□ -1.54
TcraP01849 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC5.41□□□□□ -1.54
TcraP01849 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC5.41□□□□□ -1.54
TcraP01849 CT571271.1-201ENSMUST00000227071 670 ntBASIC5.41□□□□□ -1.54
TcraP01849 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm29670-201ENSMUST00000190228 2491 ntBASIC5.41□□□□□ -1.54
TcraP01849 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
TcraP01849 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
TcraP01849 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.41□□□□□ -1.54
TcraP01849 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TcraP01849 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm1982-201ENSMUST00000188615 1887 ntBASIC5.41□□□□□ -1.54
TcraP01849 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.41□□□□□ -1.54
TcraP01849 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TcraP01849 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TcraP01849 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TcraP01849 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TcraP01849 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
TcraP01849 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TcraP01849 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TcraP01849 AU020206-202ENSMUST00000206358 3009 ntBASIC5.4□□□□□ -1.54
TcraP01849 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.4□□□□□ -1.54
TcraP01849 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Gm6866-201ENSMUST00000188559 2549 ntBASIC5.4□□□□□ -1.54
TcraP01849 Gm43429-201ENSMUST00000197889 2251 ntBASIC5.4□□□□□ -1.54
TcraP01849 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC5.4□□□□□ -1.54
TcraP01849 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TcraP01849 Gm24335-201ENSMUST00000104211 132 ntBASIC5.4□□□□□ -1.54
TcraP01849 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC5.4□□□□□ -1.54
TcraP01849 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Gm15048-201ENSMUST00000118201 954 ntBASIC5.4□□□□□ -1.54
TcraP01849 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
TcraP01849 Gm12870-201ENSMUST00000121383 1016 ntBASIC5.4□□□□□ -1.54
TcraP01849 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC5.4□□□□□ -1.54
TcraP01849 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC5.4□□□□□ -1.54
TcraP01849 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC5.4□□□□□ -1.54
TcraP01849 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TcraP01849 Gm17572-201ENSMUST00000171455 420 ntBASIC5.4□□□□□ -1.54
TcraP01849 Gm7211-201ENSMUST00000172692 1118 ntBASIC5.4□□□□□ -1.54
TcraP01849 Gm23187-201ENSMUST00000175746 86 ntBASIC5.4□□□□□ -1.54
TcraP01849 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
TcraP01849 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC5.4□□□□□ -1.54
TcraP01849 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TcraP01849 Gm28530-201ENSMUST00000190473 577 ntBASIC5.4□□□□□ -1.54
TcraP01849 Gm18699-201ENSMUST00000190713 243 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms