Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Gm37980-201ENSMUST00000194420 1910 ntBASIC6.67□□□□□ -1.34
Scrt1Q99M85 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Grik1-210ENSMUST00000228034 2708 ntBASIC6.67□□□□□ -1.34
Scrt1Q99M85 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Zfp939-201ENSMUST00000061201 2131 ntBASIC6.67□□□□□ -1.34
Scrt1Q99M85 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Scrt1Q99M85 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scrt1Q99M85 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Grik1-209ENSMUST00000227986 2942 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm43589-201ENSMUST00000199400 1523 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm42656-201ENSMUST00000201506 2305 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm6284-201ENSMUST00000209609 4287 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm25614-201ENSMUST00000104013 133 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm14248-201ENSMUST00000117790 544 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm26184-201ENSMUST00000157686 131 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm22132-201ENSMUST00000175316 100 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm7481-201ENSMUST00000182020 995 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm27458-201ENSMUST00000185108 121 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm7115-201ENSMUST00000193706 832 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm44590-201ENSMUST00000206161 391 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm9249-201ENSMUST00000221420 578 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm43766-201ENSMUST00000200590 5417 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.66□□□□□ -1.34
Scrt1Q99M85 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scrt1Q99M85 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm38331-201ENSMUST00000195719 2671 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gm10764-202ENSMUST00000220397 2335 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.65□□□□□ -1.34
Scrt1Q99M85 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Scrt1Q99M85 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 146.8 ms