Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim29Q8R2Q0 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm7091-201ENSMUST00000116438 586 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm18349-201ENSMUST00000187440 904 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm8004-201ENSMUST00000187782 617 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm7200-201ENSMUST00000188426 1163 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm28239-201ENSMUST00000190225 447 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 AC131586.4-201ENSMUST00000228424 668 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gm9801-201ENSMUST00000054860 408 ntBASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim29Q8R2Q0 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm23529-201ENSMUST00000104562 132 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm12123-201ENSMUST00000120348 472 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm11259-201ENSMUST00000120554 715 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm22670-201ENSMUST00000158724 143 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm37392-201ENSMUST00000192098 516 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm7542-201ENSMUST00000201140 777 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 AC154747.4-202ENSMUST00000223826 852 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm6807-201ENSMUST00000077435 888 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Klf10-202ENSMUST00000226363 2917 ntBASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim29Q8R2Q0 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms