Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 AC154461.5-201ENSMUST00000225429 774 ntBASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 AC161537.1-202ENSMUST00000228450 868 ntBASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Gm20731-201ENSMUST00000193462 2288 ntBASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Gm38099-201ENSMUST00000193280 3170 ntBASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sf3a1Q8K4Z5 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Gm17841-201ENSMUST00000210711 2425 ntBASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Sf3a1Q8K4Z5 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm12583-201ENSMUST00000120677 853 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Mir1932-201ENSMUST00000157390 90 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm23079-201ENSMUST00000157847 117 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm26784-201ENSMUST00000181666 410 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Mir7029-201ENSMUST00000184777 61 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm20111-201ENSMUST00000184830 319 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm43226-201ENSMUST00000202438 259 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm5250-201ENSMUST00000059065 321 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm42546-201ENSMUST00000201584 2592 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm11855-201ENSMUST00000121562 1869 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Gm7961-201ENSMUST00000201338 1436 ntBASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3a1Q8K4Z5 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 AC120347.1-201ENSMUST00000223326 1639 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm6490-201ENSMUST00000111862 461 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm11895-201ENSMUST00000122165 467 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm25692-201ENSMUST00000175444 125 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm5445-201ENSMUST00000180224 480 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm27458-201ENSMUST00000185108 121 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm21139-201ENSMUST00000186594 877 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm32842-201ENSMUST00000212653 738 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 AC157650.2-201ENSMUST00000224666 328 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Zfp874a-208ENSMUST00000225479 1092 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm10388-201ENSMUST00000205001 2936 ntBASIC9.2□□□□□ -0.94
Sf3a1Q8K4Z5 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms