Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Tpm1P58771 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.23□□□□□ -1.09
Tpm1P58771 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC8.23□□□□□ -1.09
Tpm1P58771 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC8.23□□□□□ -1.09
Tpm1P58771 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.23□□□□□ -1.09
Tpm1P58771 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm20702-201ENSMUST00000176181 460 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Gm12424-201ENSMUST00000179673 447 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Gm8524-201ENSMUST00000186232 379 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm29562-201ENSMUST00000190113 904 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm4259-201ENSMUST00000206489 758 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Gm45255-201ENSMUST00000209943 811 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Gm7368-201ENSMUST00000213307 367 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.23□□□□□ -1.09
Tpm1P58771 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm18362-201ENSMUST00000221786 529 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Gnpnat1-202ENSMUST00000226276 710 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.23□□□□□ -1.09
Tpm1P58771 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.23□□□□□ -1.09
Tpm1P58771 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Tpm1P58771 Gm13456-201ENSMUST00000118928 1365 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm16409-201ENSMUST00000100510 747 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm13254-201ENSMUST00000118295 654 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm12604-201ENSMUST00000118382 380 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm14202-201ENSMUST00000120121 311 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm6292-201ENSMUST00000120712 1095 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm9143-201ENSMUST00000120745 745 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm8172-201ENSMUST00000120762 750 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm13674-201ENSMUST00000121276 823 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Tpm1P58771 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm18552-201ENSMUST00000187425 538 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm43310-201ENSMUST00000198975 820 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm30619-201ENSMUST00000213962 686 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Gm18339-201ENSMUST00000218074 888 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 AC165260.5-201ENSMUST00000224640 1247 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Tpm1P58771 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Tpm1P58771 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.22□□□□□ -1.09
Tpm1P58771 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Tpm1P58771 Gm42603-201ENSMUST00000199893 2146 ntBASIC8.21□□□□□ -1.09
Tpm1P58771 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.21□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 186.5 ms