Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rrp1P56183 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rrp1P56183 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rrp1P56183 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rrp1P56183 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rrp1P56183 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.4□□□□□ -1.07
Rrp1P56183 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Rrp1P56183 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rrp1P56183 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Rrp1P56183 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.39□□□□□ -1.07
Rrp1P56183 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rrp1P56183 Gm8662-201ENSMUST00000118644 574 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 Gm13915-201ENSMUST00000119314 931 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC8.39□□□□□ -1.07
Rrp1P56183 Gm24530-201ENSMUST00000157948 288 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC8.39□□□□□ -1.07
Rrp1P56183 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.39□□□□□ -1.07
Rrp1P56183 Mir6340-201ENSMUST00000183857 119 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.39□□□□□ -1.07
Rrp1P56183 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.39□□□□□ -1.07
Rrp1P56183 Gm42431-201ENSMUST00000196880 323 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 Gm43013-201ENSMUST00000198216 247 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.39□□□□□ -1.07
Rrp1P56183 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.39□□□□□ -1.07
Rrp1P56183 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC8.39□□□□□ -1.07
Rrp1P56183 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rrp1P56183 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rrp1P56183 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rrp1P56183 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rrp1P56183 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.38□□□□□ -1.07
Rrp1P56183 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 AC132384.7-201ENSMUST00000220198 1391 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Gm24071-201ENSMUST00000104520 132 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm26407-201ENSMUST00000158504 307 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Gm6428-201ENSMUST00000161062 345 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Gm19840-201ENSMUST00000169624 882 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm9149-201ENSMUST00000182724 1007 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm37481-201ENSMUST00000195176 403 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm43212-201ENSMUST00000198208 394 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Gm44285-201ENSMUST00000203557 940 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm33778-201ENSMUST00000216884 704 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Gm4898-201ENSMUST00000218519 832 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.38□□□□□ -1.07
Rrp1P56183 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
Rrp1P56183 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.38□□□□□ -1.07
Rrp1P56183 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rrp1P56183 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Rrp1P56183 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rrp1P56183 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
Rrp1P56183 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 146.9 ms