Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Mir1983-201ENSMUST00000157523 132 ntBASIC8.02□□□□□ -1.13
NcanP55066 Gm25556-201ENSMUST00000158077 144 ntBASIC8.02□□□□□ -1.13
NcanP55066 Gm27210-201ENSMUST00000184263 402 ntBASIC8.02□□□□□ -1.13
NcanP55066 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC8.02□□□□□ -1.13
NcanP55066 AC153847.1-201ENSMUST00000214524 353 ntBASIC8.02□□□□□ -1.13
NcanP55066 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.02□□□□□ -1.13
NcanP55066 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
NcanP55066 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.02□□□□□ -1.13
NcanP55066 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
NcanP55066 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
NcanP55066 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC8.02□□□□□ -1.13
NcanP55066 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 AC132465.1-201ENSMUST00000219938 1307 ntBASIC8.02□□□□□ -1.13
NcanP55066 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.02□□□□□ -1.13
NcanP55066 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NcanP55066 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.01□□□□□ -1.13
NcanP55066 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
NcanP55066 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
NcanP55066 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
NcanP55066 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.01□□□□□ -1.13
NcanP55066 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 AC153940.1-201ENSMUST00000220149 5300 ntBASIC8.01□□□□□ -1.13
NcanP55066 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
NcanP55066 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Gm9144-201ENSMUST00000101625 1008 ntBASIC8.01□□□□□ -1.13
NcanP55066 Gm13196-201ENSMUST00000118297 379 ntBASIC8.01□□□□□ -1.13
NcanP55066 Gm11889-201ENSMUST00000118402 1079 ntBASIC8.01□□□□□ -1.13
NcanP55066 Gm11895-201ENSMUST00000122165 467 ntBASIC8.01□□□□□ -1.13
NcanP55066 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.01□□□□□ -1.13
NcanP55066 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Gm36961-201ENSMUST00000191980 132 ntBASIC8.01□□□□□ -1.13
NcanP55066 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.01□□□□□ -1.13
NcanP55066 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 AC153961.1-201ENSMUST00000217760 385 ntBASIC8.01□□□□□ -1.13
NcanP55066 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.01□□□□□ -1.13
NcanP55066 AC122251.1-201ENSMUST00000227717 639 ntBASIC8.01□□□□□ -1.13
NcanP55066 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
NcanP55066 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC8.01□□□□□ -1.13
NcanP55066 Gm16415-201ENSMUST00000080097 489 ntBASIC8.01□□□□□ -1.13
NcanP55066 Gm26003-201ENSMUST00000083061 113 ntBASIC8.01□□□□□ -1.13
NcanP55066 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.01□□□□□ -1.13
NcanP55066 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 Dennd6a-205ENSMUST00000224378 2424 ntBASIC8.01□□□□□ -1.13
NcanP55066 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
NcanP55066 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
NcanP55066 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.01□□□□□ -1.13
NcanP55066 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.01□□□□□ -1.13
NcanP55066 Gm42895-201ENSMUST00000200761 2996 ntBASIC8.01□□□□□ -1.13
NcanP55066 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
NcanP55066 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC8□□□□□ -1.13
NcanP55066 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
NcanP55066 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
NcanP55066 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NcanP55066 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NcanP55066 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC8□□□□□ -1.13
NcanP55066 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
NcanP55066 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8□□□□□ -1.13
NcanP55066 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8□□□□□ -1.13
NcanP55066 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
NcanP55066 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
NcanP55066 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
NcanP55066 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC8□□□□□ -1.13
NcanP55066 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
NcanP55066 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
NcanP55066 Gm15109-201ENSMUST00000133085 2026 ntBASIC8□□□□□ -1.13
NcanP55066 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 128.3 ms