Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC7.64□□□□□ -1.19
Atxn1P54254 Gm28186-201ENSMUST00000187447 679 ntBASIC7.64□□□□□ -1.19
Atxn1P54254 Gm7560-201ENSMUST00000187748 873 ntBASIC7.64□□□□□ -1.19
Atxn1P54254 Gm28443-201ENSMUST00000189081 698 ntBASIC7.64□□□□□ -1.19
Atxn1P54254 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Gm37469-201ENSMUST00000193728 890 ntBASIC7.64□□□□□ -1.19
Atxn1P54254 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC7.64□□□□□ -1.19
Atxn1P54254 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.64□□□□□ -1.19
Atxn1P54254 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.64□□□□□ -1.19
Atxn1P54254 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.64□□□□□ -1.19
Atxn1P54254 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.64□□□□□ -1.19
Atxn1P54254 Gm45725-201ENSMUST00000212962 337 ntBASIC7.64□□□□□ -1.19
Atxn1P54254 Gm18591-201ENSMUST00000220568 763 ntBASIC7.64□□□□□ -1.19
Atxn1P54254 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Atxn1P54254 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Atxn1P54254 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 AC130219.1-201ENSMUST00000228406 3433 ntBASIC7.63□□□□□ -1.19
Atxn1P54254 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Atxn1P54254 Gm12653-201ENSMUST00000117778 561 ntBASIC7.63□□□□□ -1.19
Atxn1P54254 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.63□□□□□ -1.19
Atxn1P54254 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Atxn1P54254 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.63□□□□□ -1.19
Atxn1P54254 Gm23958-201ENSMUST00000157207 105 ntBASIC7.63□□□□□ -1.19
Atxn1P54254 Gm3344-201ENSMUST00000169610 603 ntBASIC7.63□□□□□ -1.19
Atxn1P54254 Gm27542-201ENSMUST00000184184 256 ntBASIC7.63□□□□□ -1.19
Atxn1P54254 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Gm28864-201ENSMUST00000189251 644 ntBASIC7.63□□□□□ -1.19
Atxn1P54254 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Gm8182-201ENSMUST00000197863 769 ntBASIC7.63□□□□□ -1.19
Atxn1P54254 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.63□□□□□ -1.19
Atxn1P54254 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Atxn1P54254 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Atxn1P54254 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Atxn1P54254 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Atxn1P54254 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC7.62□□□□□ -1.19
Atxn1P54254 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Atxn1P54254 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Atxn1P54254 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC7.62□□□□□ -1.19
Atxn1P54254 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Atxn1P54254 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Atxn1P54254 Gm6754-201ENSMUST00000117124 913 ntBASIC7.62□□□□□ -1.19
Atxn1P54254 Gm13521-201ENSMUST00000118922 866 ntBASIC7.62□□□□□ -1.19
Atxn1P54254 Gm12804-201ENSMUST00000121030 999 ntBASIC7.62□□□□□ -1.19
Atxn1P54254 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Atxn1P54254 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.62□□□□□ -1.19
Atxn1P54254 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
Atxn1P54254 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Atxn1P54254 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.62□□□□□ -1.19
Atxn1P54254 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms