Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC11.38□□□□□ -0.59
Cux1P53564 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC11.38□□□□□ -0.59
Cux1P53564 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC11.38□□□□□ -0.59
Cux1P53564 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC11.38□□□□□ -0.59
Cux1P53564 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cux1P53564 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cux1P53564 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cux1P53564 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cux1P53564 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cux1P53564 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cux1P53564 Gm22774-201ENSMUST00000102084 109 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cux1P53564 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cux1P53564 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Gm8662-201ENSMUST00000118644 574 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Gm8722-201ENSMUST00000121466 769 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC11.37□□□□□ -0.59
Cux1P53564 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Cux1P53564 Gm25395-201ENSMUST00000157343 272 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Gm26323-201ENSMUST00000157743 175 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC11.37□□□□□ -0.59
Cux1P53564 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cux1P53564 Mir3078-201ENSMUST00000175231 87 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Cux1P53564 Gm28117-201ENSMUST00000188472 371 ntBASIC11.37□□□□□ -0.59
Cux1P53564 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cux1P53564 Gm2860-201ENSMUST00000199226 707 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cux1P53564 Gm45279-201ENSMUST00000210315 391 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC11.37□□□□□ -0.59
Cux1P53564 Gm4042-201ENSMUST00000216946 637 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Gm2089-201ENSMUST00000218294 479 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Gm2654-201ENSMUST00000221381 1592 ntBASIC11.37□□□□□ -0.59
Cux1P53564 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cux1P53564 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC11.37□□□□□ -0.59
Cux1P53564 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cux1P53564 Gm43123-201ENSMUST00000201893 3471 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cux1P53564 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cux1P53564 Gm21043-201ENSMUST00000199316 1517 ntBASIC11.37□□□□□ -0.59
Cux1P53564 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cux1P53564 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Gm22256-201ENSMUST00000102291 107 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Gm25877-201ENSMUST00000104326 129 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Gm5406-201ENSMUST00000120054 766 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Gm24155-201ENSMUST00000175259 110 ntBASIC11.36□□□□□ -0.59
Cux1P53564 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC11.36□□□□□ -0.59
Cux1P53564 Gm42708-201ENSMUST00000196332 905 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Gm18995-201ENSMUST00000202981 520 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC11.36□□□□□ -0.59
Cux1P53564 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC11.36□□□□□ -0.59
Cux1P53564 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cux1P53564 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cux1P53564 Smcr8-202ENSMUST00000102667 3544 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Gm37520-201ENSMUST00000194883 2672 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC11.36□□□□□ -0.59
Cux1P53564 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC11.36□□□□□ -0.59
Cux1P53564 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cux1P53564 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cux1P53564 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cux1P53564 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cux1P53564 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 AC154347.1-201ENSMUST00000221358 3105 ntBASIC11.36□□□□□ -0.59
Cux1P53564 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cux1P53564 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cux1P53564 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cux1P53564 Gm25311-201ENSMUST00000104136 132 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm7613-201ENSMUST00000139070 487 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Mir1929-201ENSMUST00000158635 93 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC11.35□□□□□ -0.59
Cux1P53564 Gm3760-201ENSMUST00000167475 804 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cux1P53564 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cux1P53564 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cux1P53564 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cux1P53564 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cux1P53564 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cux1P53564 Gm8357-201ENSMUST00000181115 1011 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Mir6244-201ENSMUST00000184156 117 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm27804-201ENSMUST00000185135 119 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Gm4751-201ENSMUST00000200620 1105 ntBASIC11.35□□□□□ -0.59
Cux1P53564 AC187103.4-201ENSMUST00000225399 300 ntBASIC11.35□□□□□ -0.59
Cux1P53564 AC122309.1-201ENSMUST00000226945 421 ntBASIC11.35□□□□□ -0.59
Cux1P53564 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms