Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm9246-201ENSMUST00000117587 3490 ntBASIC7.83□□□□□ -1.16
Trim39Q9ESN2 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Catspere1-201ENSMUST00000194528 2949 ntBASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 CT010465.1-202ENSMUST00000221816 1355 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Myo19-201ENSMUST00000020837 1669 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Trim39Q9ESN2 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 I830134H01Rik-202ENSMUST00000181592 2755 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm33994-201ENSMUST00000193724 2414 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Dnaic1-201ENSMUST00000102963 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Reg3a-201ENSMUST00000101272 825 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 S100a16-204ENSMUST00000107333 608 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Timp1-202ENSMUST00000115342 883 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm15033-201ENSMUST00000118188 673 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Iqcc-202ENSMUST00000121442 491 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm16077-201ENSMUST00000121915 655 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm13049-201ENSMUST00000133196 757 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 D630024D03Rik-203ENSMUST00000134944 715 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Aox3-205ENSMUST00000162011 1568 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Elf5-207ENSMUST00000171693 965 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm8488-201ENSMUST00000176112 1280 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm21762-201ENSMUST00000177561 456 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm6919-201ENSMUST00000180049 483 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm18980-201ENSMUST00000199098 1079 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm44658-201ENSMUST00000207965 637 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 4930477N07Rik-201ENSMUST00000218762 614 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm18783-201ENSMUST00000220465 1151 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 AC166358.6-201ENSMUST00000221834 1206 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm4257-201ENSMUST00000222877 513 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm18955-201ENSMUST00000223173 649 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 CT025603.3-201ENSMUST00000224031 419 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 AC163038.2-201ENSMUST00000224851 650 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 AC140406.2-201ENSMUST00000227539 481 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 AC107453.2-201ENSMUST00000227714 655 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 5330417H12Rik-201ENSMUST00000060348 1191 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Mir130b-201ENSMUST00000083638 82 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm6505-201ENSMUST00000094335 648 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Abhd12b-206ENSMUST00000182927 1544 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm12904-201ENSMUST00000117451 1399 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm42899-201ENSMUST00000197034 2667 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms