Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Tdrd5-204ENSMUST00000167528 3210 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Pcdhb7Q8CDY9 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm26633-201ENSMUST00000180546 3256 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Spdye4b-201ENSMUST00000031574 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Catspere1-201ENSMUST00000194528 2949 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Cenpq-201ENSMUST00000087114 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Trim21-201ENSMUST00000033264 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm43790-201ENSMUST00000202694 2013 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 S100a16-204ENSMUST00000107333 608 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm14994-201ENSMUST00000117482 1092 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm13198-201ENSMUST00000119322 826 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm12103-201ENSMUST00000121892 362 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm12949-201ENSMUST00000143382 362 ntTSL 3 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Slc15a2-205ENSMUST00000164579 1068 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm21762-201ENSMUST00000177561 456 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm42654-201ENSMUST00000200789 494 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm42646-201ENSMUST00000202233 914 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm7836-201ENSMUST00000209730 432 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm19196-202ENSMUST00000210709 321 ntTSL 2 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm19196-203ENSMUST00000211164 363 ntTSL 2 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm33053-201ENSMUST00000215275 1144 ntTSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm6906-201ENSMUST00000218014 569 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 4930477N07Rik-201ENSMUST00000218762 614 ntTSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 AC156576.1-201ENSMUST00000222315 500 ntTSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Taf1b-203ENSMUST00000222710 521 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Arhgef33-207ENSMUST00000224966 490 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm7936-201ENSMUST00000069529 375 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm22977-201ENSMUST00000082615 107 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Mir130b-201ENSMUST00000083638 82 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 AU021092-201ENSMUST00000050160 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 AC102431.2-201ENSMUST00000224071 2448 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm43280-201ENSMUST00000202958 1550 ntBASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Ano4-208ENSMUST00000182613 3880 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Cdh26-202ENSMUST00000108912 2908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Slc30a6-201ENSMUST00000024870 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdhb7Q8CDY9 Gm20679-201ENSMUST00000177285 1402 ntBASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Abhd12b-206ENSMUST00000182927 1544 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Olfr462-202ENSMUST00000213672 2021 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Gm4849-201ENSMUST00000188428 2246 ntBASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Gm43872-201ENSMUST00000203218 2213 ntBASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Gm33994-201ENSMUST00000193724 2414 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 AC132412.1-201ENSMUST00000204155 2724 ntBASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 L3mbtl3-203ENSMUST00000174766 3411 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Gm28307-201ENSMUST00000190685 2694 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Gpr85-203ENSMUST00000115492 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Tex24-201ENSMUST00000095375 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Magea2-201ENSMUST00000069477 1685 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Sdr16c5-201ENSMUST00000040925 1385 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Pcdhb7Q8CDY9 Btnl10-203ENSMUST00000108818 1028 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms