Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm24300-201ENSMUST00000177809 109 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm24017-201ENSMUST00000178726 109 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm23952-201ENSMUST00000179380 109 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm26269-201ENSMUST00000180144 126 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm29214-201ENSMUST00000190216 570 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm36961-201ENSMUST00000191980 132 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 AC155266.1-201ENSMUST00000220762 904 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 AC173482.3-201ENSMUST00000225492 1212 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 CU024890.1-201ENSMUST00000221361 2019 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 CT009515.4-201ENSMUST00000228165 1494 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm24048-201ENSMUST00000102411 106 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm25916-201ENSMUST00000104263 131 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm13526-201ENSMUST00000117970 189 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm15842-201ENSMUST00000120513 618 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm22224-201ENSMUST00000157357 93 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm5973-201ENSMUST00000178542 496 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm37436-201ENSMUST00000193842 1085 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm4796-201ENSMUST00000219802 624 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm10123-201ENSMUST00000075723 490 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps53Q8CCB4 Gm38014-201ENSMUST00000193349 2612 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm7571-201ENSMUST00000120252 927 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm25780-201ENSMUST00000122528 253 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm17867-201ENSMUST00000188981 391 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm37319-201ENSMUST00000193500 636 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm2065-201ENSMUST00000194697 2757 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm7542-201ENSMUST00000201140 777 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm43812-202ENSMUST00000202701 581 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm8921-201ENSMUST00000204306 649 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm8575-201ENSMUST00000210262 521 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm19056-201ENSMUST00000218220 797 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms