Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm6931-201ENSMUST00000183103 371 ntBASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm37678-201ENSMUST00000192908 1146 ntBASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm18469-201ENSMUST00000208850 439 ntBASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm9289-201ENSMUST00000221269 606 ntBASIC8.24□□□□□ -1.09
Trim9Q8C7M3 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm26226-201ENSMUST00000082509 116 ntBASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm45354-201ENSMUST00000199820 2557 ntBASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim9Q8C7M3 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm13742-201ENSMUST00000118805 457 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm11343-201ENSMUST00000120579 599 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm5611-201ENSMUST00000164523 852 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Mir7115-201ENSMUST00000184275 64 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm28341-201ENSMUST00000190883 472 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm37392-201ENSMUST00000192098 516 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm44356-201ENSMUST00000196731 111 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.23□□□□□ -1.09
Trim9Q8C7M3 Gm6767-201ENSMUST00000118650 1381 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm24373-201ENSMUST00000104393 132 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm11928-201ENSMUST00000119323 437 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm11622-201ENSMUST00000120525 691 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm11945-201ENSMUST00000120551 476 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm14380-201ENSMUST00000122298 431 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm15843-201ENSMUST00000146593 529 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm20111-201ENSMUST00000184830 319 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm18349-201ENSMUST00000187440 904 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm5244-202ENSMUST00000189517 743 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms