Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Trav8-2-201ENSMUST00000130122 337 ntBASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Gm24782-201ENSMUST00000157641 132 ntBASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Gm4780-201ENSMUST00000213206 1242 ntBASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 AC152940.1-201ENSMUST00000226504 139 ntBASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 AC125087.1-201ENSMUST00000227552 514 ntBASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Gm43618-201ENSMUST00000197392 3451 ntBASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ccdc60Q8C4J0 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm23834-201ENSMUST00000104436 129 ntBASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm19035-202ENSMUST00000194575 959 ntBASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm2505-201ENSMUST00000200413 825 ntBASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm44192-201ENSMUST00000204195 556 ntBASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 AC154838.3-201ENSMUST00000228876 965 ntBASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC9.47□□□□□ -0.89
Ccdc60Q8C4J0 AC154141.1-201ENSMUST00000208403 4136 ntBASIC9.46□□□□□ -0.89
Ccdc60Q8C4J0 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc60Q8C4J0 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc60Q8C4J0 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc60Q8C4J0 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc60Q8C4J0 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc60Q8C4J0 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ccdc60Q8C4J0 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Defa-ps7-201ENSMUST00000117139 168 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm14248-201ENSMUST00000117790 544 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm13282-201ENSMUST00000121577 545 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm9723-201ENSMUST00000192100 457 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm6197-201ENSMUST00000192273 454 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm44777-201ENSMUST00000205941 4052 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm37367-201ENSMUST00000191771 2602 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Gm43123-201ENSMUST00000201893 3471 ntBASIC9.46□□□□□ -0.9
Ccdc60Q8C4J0 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Ccdc60Q8C4J0 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc60Q8C4J0 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC9.45□□□□□ -0.9
Ccdc60Q8C4J0 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ccdc60Q8C4J0 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc60Q8C4J0 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms