Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Gm45629-201ENSMUST00000209629 2546 ntBASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Pcdh19Q80TF3 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Pcdh19Q80TF3 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Pcdh19Q80TF3 Gm43872-201ENSMUST00000203218 2213 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm42811-201ENSMUST00000201951 2768 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm14445-201ENSMUST00000117051 1484 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm14837-201ENSMUST00000119688 206 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm5270-201ENSMUST00000121506 1002 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm23426-201ENSMUST00000122483 318 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm15878-201ENSMUST00000127561 306 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm17097-201ENSMUST00000166414 714 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm25947-201ENSMUST00000180343 110 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm27001-201ENSMUST00000182252 936 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm28546-201ENSMUST00000188221 615 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm5539-201ENSMUST00000192177 966 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm38337-201ENSMUST00000193986 599 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm42861-201ENSMUST00000199596 634 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm43694-201ENSMUST00000200773 1119 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm4602-201ENSMUST00000203198 308 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm19201-201ENSMUST00000210127 778 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm5173-201ENSMUST00000219616 950 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm8153-201ENSMUST00000219844 952 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm19340-201ENSMUST00000221995 345 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Mrgprb4-201ENSMUST00000094388 1219 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm10704-201ENSMUST00000098952 730 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 CT009536.1-201ENSMUST00000223774 2151 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Unc45b-201ENSMUST00000018989 3549 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Pcdh19Q80TF3 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Pcdh19Q80TF3 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms