Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm8836-201ENSMUST00000198196 1348 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm12584-201ENSMUST00000117109 1105 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm13929-201ENSMUST00000117553 1125 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm10651-201ENSMUST00000118212 609 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm14836-201ENSMUST00000118567 471 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm6292-201ENSMUST00000120712 1095 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm8084-201ENSMUST00000120807 752 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 BC002163-201ENSMUST00000121906 319 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm17258-201ENSMUST00000168462 1266 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Mir3072-201ENSMUST00000175610 83 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm5575-201ENSMUST00000190879 398 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm8407-201ENSMUST00000192719 427 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm18984-201ENSMUST00000193998 1124 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm17530-201ENSMUST00000194336 472 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm44743-201ENSMUST00000209062 386 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm33096-201ENSMUST00000210189 493 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC8.37□□□□□ -1.07
Cntn3Q07409 AC105958.1-201ENSMUST00000214783 2144 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC8.37□□□□□ -1.07
Cntn3Q07409 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm5514-201ENSMUST00000060477 306 ntBASIC8.37□□□□□ -1.07
Cntn3Q07409 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Cntn3Q07409 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.37□□□□□ -1.07
Cntn3Q07409 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cntn3Q07409 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm40309-201ENSMUST00000202699 1752 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Cntn3Q07409 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Cntn3Q07409 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm24334-201ENSMUST00000104210 128 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC8.36□□□□□ -1.07
Cntn3Q07409 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm14036-201ENSMUST00000118248 480 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm12098-201ENSMUST00000118277 508 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm12465-201ENSMUST00000118591 300 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm9392-201ENSMUST00000119337 554 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm15836-201ENSMUST00000119952 793 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm12123-201ENSMUST00000120348 472 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm5931-201ENSMUST00000121308 477 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm7707-201ENSMUST00000165950 1156 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm17164-201ENSMUST00000169013 506 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC8.36□□□□□ -1.07
Cntn3Q07409 Gm42558-201ENSMUST00000200982 265 ntBASIC8.36□□□□□ -1.07
Cntn3Q07409 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms